hi everyone,
i am successfully running blast in batch mode on campus. unfortunately,
there were so many things that i changed, that i'm not sure i remember
what the real problem was. I think the main problems
i had were just path problems. once i set CERNLIBPATH properly, i think
that helped. i don't know if this helps or not, but i do have it
working now.
good luck,
jason
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jason seely
26.650b
massachusetts institute of technology
77 massachusetts avenue
cambridge, ma 02139-4307
email: seely@mit.edu
phone: 617.253.4772/6734
html: web.mit.edu/seely/www
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On Wed, 5 Dec 2001, Sean Stave wrote:
> Hello Blasters:
>
> Does anyone have blastmc running in batch mode on campus? I tried:
>
> blast -b -f fort.36 -t 100
> and
> blast -f fort.36 -t 100 -b
>
> and both gave errors about not finding batch files.
>
> I also cannot get batch to work by piping in the commands, i.e.:
>
> blast < in
> where in is:
> 0
> read 36
> kine 3 3. 0.5 0.5 45. 45. 0. 0.
> trig 5
> exit
>
> ---------
> I get these galore:
> *** Break *** Segmentation violation
> Traceq lun = 0, level = 99
>
> TRACEQ. In-line trace-back still not available.
> Longjump
>
> --------
>
> Anyway, if anyone has a solution, I would appreciate it. Thanks.
>
> -Sean Stave
>
>
>
>
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