Hi, Karen,
Actually last night I realized this problem, and I tried to fix the
corresponding databases by view.tcl. But somehow I just succeeded in
run 16289, and failed on 16287, then I gave up.
Is that the right and only way to fix databases?
Best,
Yuan
Quoting Karen Dow <kdow@MIT.EDU>:
>
> I have fixed the database for runs 16095, 16141, 16286 and
> 16287. All these runs were missing the StopTime, and ValidConf, ValidData
> were both set to UNCONFIRMED. I suspect the next run was started before
> the big red Done button was pushed for all these runs. BE PATIENT -- the
> end-of-run screen talks to the database and that can take a minute!!!
>
> I submitted 16095, 16141 and 16286 to the autocruncher. 16287 had
> been partially repaired by someone and resubmitted already.
>
> Run 16281 has no entry in the database at all. I'll have to look
> back through elog/BLAST_TALK to see how to create an entry.
>
> While fixing the entry for run 16286, I realized that when we
> resumed with unpol running yesterday, people didn't change the entries for
> the beginning-of-run screen, so runs 16282-16288 were all marked as
> BlastCurrent=0, BlastPolarity OFF, Target COSMICS. I corrected the entries
> to 6730, e- INBENDING, UNPOL. The autocruncher may not use those entries,
> but as Michael pointed out last week, searching the database is a LOT more
> useful if the information in it is correct!!! There are not a lot of
> things to do on shift any more -- make life easier for everyone doing
> analysis, carefully record the running conditions!!!
>
> Karen
>
> At 11:46 AM 5/26/2005 -0400, Chi Zhang wrote:
>
> >same applies to runs 16281 16286.
> >
> >On Thu, 26 May 2005, Chi Zhang wrote:
> >
> > >
> > > Hi, 16141 and 16095 did not have elog entries but are listed as good ABS
> > > D2 in RUNLIST. 16095 was the run just before Michael's message about
> elog
> > > fixed. because the missing elog, these two runs are not crunched.
> > >
> > > Chi
> > >
> > >
>
>
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